bioRxiv connector gives Claude access to bioRxiv and medRxiv preprint servers. Search preprints by topic, author, or keywords; get preprint details by DOI; get categories; search published preprints; search by funder (ROR IDs); get content and usage statistics. Coverage: 260,000+ preprints.
bioRxiv biorxiv connector gives claude access to biorxiv and medrxiv preprint servers. search preprints by topic, author, or keywords; get preprint details by doi; get categories; search published preprints; search by funder (ror ids); get content and usage statistics. coverage: 260,000+ preprints.. The official bioRxiv MCP server provides AI agents with standardized access to bioRxiv's services, enabling powerful automation and integration capabilities that enhance developer productivity and streamline workflows.
This official MCP server is maintained and verified by bioRxiv, ensuring reliability, security, and up-to-date functionality. Unlike community-maintained servers, this official integration provides long-term support, comprehensive documentation, and direct vendor assistance. The server is hosted on biorxiv.org, guaranteeing secure and reliable access to bioRxiv's services.
Whether you're building AI-powered applications, automating workflows, or enhancing your development tools, the bioRxiv MCP server provides a standardized way to connect AI agents with bioRxiv's extensive platform capabilities. This integration enables natural language interactions with bioRxiv, making it easier than ever to leverage bioRxiv's features through AI assistants like Claude, ChatGPT, and Cursor.
https://mcp.deepsense.ai/biorxiv/mcpGo to Settings → Cursor Settings
Click "Add new global MCP Server"
Paste the MCP configuration into mcp.json and restart
Or manually add to your mcp.json:
{
"mcpServers": {
"biorxiv": {
"url": "https://mcp.deepsense.ai/biorxiv/mcp"
}
}
}The official bioRxiv MCP server enables AI agents to:
These capabilities make it easy for AI agents to work with bioRxiv as part of a larger automation strategy, enabling seamless integration between AI assistants and your existing tools.
The bioRxiv MCP server provides 7 tools for AI agents to interact with the platform. Use the search below to find specific tools.
| Tool Name | Description |
|---|---|
get_categories | List all subject categories for bioRxiv (26) and medRxiv (40+) |
get_content_statistics | Retrieve bioRxiv submission statistics: new papers, revisions, authors, cumulative totals by interval |
get_preprint_details | Retrieve full metadata for a preprint by DOI: title, abstract, authors, version history, publication status, PDF/HTML links |
get_usage_statistics | Retrieve bioRxiv engagement statistics: abstract views, full-text views, PDF downloads by interval |
search_by_funder | Find preprints by funding source using ROR IDs (e.g. NIH, NSF, Wellcome Trust) |
search_preprints | Search bioRxiv and medRxiv preprints by keywords, topics, authors, or category; filter by date and server |
search_published_preprints | Find preprints that have been published in peer-reviewed journals; optional filter by publisher DOI prefix |
Last updated: March 1, 2026 at 12:00 PM
AI agents can use the bioRxiv MCP server to automate repetitive tasks and manage workflows within bioRxiv's platform.
The MCP server allows AI agents to query and retrieve data from bioRxiv, enabling intelligent data analysis and insights.
Developers can integrate bioRxiv capabilities directly into their AI coding assistants for seamless workflows.
Visit https://www.biorxiv.org, create an account, and generate an API key from your dashboard. Most tools offer a free tier to get started, making it easy to begin using the bioRxiv MCP server.
Yes, this MCP server is officially provided and maintained by bioRxiv. The endpoint https://mcp.deepsense.ai/biorxiv/mcp is hosted on their official domain biorxiv.org, ensuring reliability and security.
The bioRxiv MCP server requires appropriate API credentials and permissions based on the operations you want to perform. Check the documentation for specific permission requirements.
Yes, you can configure the same MCP server across Cursor, Claude Desktop, Cline, and other MCP-compatible clients simultaneously. Each client maintains its own configuration.
The MCP server itself is free to use, but you may need a bioRxiv account and API access, which may have its own pricing tiers. Check https://www.biorxiv.org for current pricing information.
The bioRxiv MCP server enables AI agents to search the web and retrieve information. bioRxiv connector gives Claude access to bioRxiv and medRxiv preprint servers. Search preprints by topic, author, or keywords; get preprint details by DOI; get categories; search published preprints; search by funder (ROR IDs); get content and usage statistics. Coverage: 260,000+ preprints. This allows you to interact with bioRxiv's platform through natural language commands in your AI assistant.
Ensure your API key is correctly configured and your network allows outbound connections to biorxiv.org. Verify that the MCP endpoint URL https://mcp.deepsense.ai/biorxiv/mcp is accessible from your network.
Verify your API key is valid and has not expired. Generate a new key from https://www.biorxiv.org if needed. Make sure you're using the correct authentication method as specified in the documentation.
Check bioRxiv's status page for any ongoing incidents. Try restarting your MCP client and verify that the server endpoint is correct. If issues persist, consult the official documentation or support channels.
Explore other official MCP servers that work well with bioRxiv:
The Model Context Protocol (MCP) is an open standard that enables AI models to securely connect to external APIs, tools, and data sources. This official MCP server from bioRxiv provides standardized access to their services, allowing AI agents to interact with bioRxiv's platform seamlessly.
To manage all your MCP servers in one place, use Apigene's MCP Gateway, which provides centralized management, security, and governance for all your MCP server connections.
Learn more about MCP in our complete guide or browse our FAQ for common questions.